Medical schools don’t care what you did in high school. It’s all about how you performed in college. Once you’re able to get into an accredited college, you’ll be fine.

I think you are getting a little ahead of yourself. the question you should really be asking is “will virtual school affect my chances of getting into a good college?” I know when I applied to medical school, no one asked for my high school transcripts, but they care A LOT about college grades.

As far as honors/AP classes, there are pluses and minuses to them. 1) they will prepare you better for college classes. But 2) they are harder, and getting a lower grade in them may hurt your chances of getting into a high-level university. You just have to weigh your options.